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object --+
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frozenset --+
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Alignment
A storage class for representing alignment between two sequences, s1, s2. In general, an alignment is a set of tuples of the form (i, j, ...) representing an alignment between the i-th element of s1 and the j-th element of s2. Tuples are extensible (they might contain additional data, such as a boolean to indicate sure vs possible alignments).
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Inherited from |
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| a new object with type S, a subtype of T |
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Work out the range of the mapping from the given positions. If no positions are specified, compute the range of the entire mapping. |
Produce a Giza-formatted string representing the alignment.
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Produce a Giza-formatted string representing the alignment.
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| Generated by Epydoc 3.0.1 on Mon Apr 11 14:39:43 2011 | http://epydoc.sourceforge.net |